Insertion junction: CLIP2.075904_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075904
Chromosome:chromosome 13
Location:959039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568176 (1 of 5) IPR001005//IPR009057//IPR017877 - SANT/Myb domain // Homeodomain-like // Myb-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATCTCGGCCAGCCACACAAGCTGCATCCACCTTCACTTCGAGAGGAAG
Internal bar code:GCTTTTGGTATGCACCTTCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:998
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AACACTGCCTAGTCGCTCAC
Suggested primer 2:CATAGCATGCGTGTCAAGCC