Insertion junction: CLIP2.075906_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075906
Chromosome:chromosome 2
Location:2787718
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g094200 (1 of 1) PTHR24064//PTHR24064:SF245 - FAMILY NOT NAMED // ORGANIC CATION/CARNITINE TRANSPORTER 7 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTCCGCGATTGCTACTCATCAACGAATCGGTGGCATCTCCGCATCTA
Internal bar code:CAAGGGTAACCCGAGGGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCCCACCTCCATTGCAT
Suggested primer 2:CTTTGCTGTATGGCGGATGC