Insertion junction: CLIP2.075908_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075908
Chromosome:chromosome 16
Location:7021294
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673729 CPN11 Chaperonin 11, chloroplastic; (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCTGAAAGCTACCGCTATGATCTAGGAATTACGGTCATACACCCTC
Internal bar code:CAGAGGTGAGTCAGAGGTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4997
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTGGCGGATATTGCTG
Suggested primer 2:CAGCCCGTCGAGTAGCTAAG