Insertion junction: CLIP2.075909_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075909
Chromosome:chromosome 12
Location:5779896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g532700 (1 of 1) IPR000104//IPR007308 - Antifreeze protein, type I // Protein of unknown function DUF408 3'UTR
Cre12.g532750 EEP8 (1 of 1) K10772 - AP endonuclease 2 (APEX2); Endonuclease/exonuclease/phosphatase family protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGTGCGAGCCGGACAGGACGGGAGAGAAGTAGAGCGAGGGAGCCAAC
Internal bar code:ACTAGGTCGGGTTTAAGTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1288
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGCCAACGATGTGTTTT
Suggested primer 2:TGTGCAGATGTTGTTTGCGG