Insertion junction: CLIP2.075916_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075916
Chromosome:chromosome 9
Location:5069346
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406050 DIV64,PYR7 (1 of 1) 6.3.4.2 - CTP synthase (glutamine hydrolyzing) / UTP--ammonia ligase; CTP synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCTGACATGGGACTTTCTTGTCCTGACGTGTGTGACACTGGCGACT
Internal bar code:TTAGGAGATGTTATCCGCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1698
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATCACGCACCACCTCTGAAG
Suggested primer 2:GCTATTGCCGTTACTGCTGC