Insertion junction: CLIP2.075925_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075925
Chromosome:chromosome 2
Location:4716048
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108200 CGL80 Conserved in the Green Lineage; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre02.g108250 (1 of 2) PF02696 - Uncharacterized ACR, YdiU/UPF0061 family (UPF0061) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGCATGGGCATACCACATTGTTGAACGTCCGCCTCACATGCCGGCCG
Internal bar code:TTCTTTCGGGAACGGGGGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1964
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTGTGTTGCGTGTACAC
Suggested primer 2:TACCGGCTGCAACTAACCAG