Insertion junction: CLIP2.075925_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.075925
Chromosome:chromosome 7
Location:3572591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre07.g800816 (1 of 1) PTHR10073:SF7 - DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGGCACGATCGGCCCATGTACACTACGCGCAGCCGTGCGGGGGCTAC
Internal bar code:TTTGTCCGTTTTAAAGCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6153
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCTGTCCTTCTTGCCTGG
Suggested primer 2:AACACAGGAAACATGCGTGC