Insertion junction: CLIP2.075925_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075925
Chromosome:chromosome 7
Location:3572595
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336700 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR
Cre07.g800816 (1 of 1) PTHR10073:SF7 - DNA MISMATCH REPAIR PROTEIN MLH3-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTACAATGATGTCCAACAGGCGCCAGCAAGTGGTGCACTGAGAGCCAA
Internal bar code:ATGATCACGAGAATAAGGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4013
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:AACACAGGAAACATGCGTGC
Suggested primer 2:CCTCTGTCCTTCTTGCCTGG