Insertion junction: CLIP2.075935_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075935
Chromosome:chromosome 14
Location:3038243
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627850 (1 of 2) 1.17.1.8 - 4-hydroxy-tetrahydrodipicolinate reductase / Dihydrodipicolinate reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTTCCTTCACCCCATGACGCTACGGCTTTTTCCGCCTTCTTTACCGCA
Internal bar code:TTAATACTGGCATTGCGTAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:736
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAACAAACCCAGTGCT
Suggested primer 2:CCCTTGGCATCCTTTACCGT