Insertion junction: CLIP2.075944_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.075944
Chromosome:chromosome 1
Location:6852612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049132 (1 of 1) PTHR23097//PTHR23097:SF105 - TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCCAGGAAACCCGGTCAGGGGAACCTGGTTGCATACAATAAACGGCCG
Internal bar code:TGAATGAACTTAGCTCGGGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4298
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCGACAGAGTGTCTTGCAGT
Suggested primer 2:AAGGTGTTTCAGGTGGCTCC