Insertion junction: CLIP2.075950_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075950
Chromosome:chromosome 17
Location:2741696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g717750 TRL10,TRX24 (1 of 1) PTHR21148//PTHR21148:SF25 - PHOSDUCIN-RELATED // PHOSDUCIN-LIKE PROTEIN 1; Thioredoxin-like protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTTGCAGCGGTCGCAATTGCATGCGCGGGAACTCGCGGAAGAATTGT
Internal bar code:GGCGCATGTTTGTATCGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:875
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGTGGTGATGGATTGGG
Suggested primer 2:CAATAATGTCCAGCGCCAGC