Insertion junction: CLIP2.075951_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075951
Chromosome:chromosome 9
Location:3258235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394917 (1 of 4) PTHR16255//PTHR16255:SF4 - UNCHARACTERIZED // SPORULATION PROTEIN RMD8 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCCCTCAAGGGCGCCCCAGTCAGCCCCAGTGAACGCCTGTGCATCC
Internal bar code:TTGGGATGGTAGCACTAAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:669
LEAP-Seq percent confirming:7.69231
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTGTGCATGCGTGTGTT
Suggested primer 2:TTTTGGGAACTTGGGGGCTT