Insertion junction: CLIP2.075968_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.075968
Chromosome:chromosome 11
Location:3896755
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479850 CYN59 Cyclophilin 59; (1 of 1) K12735 - peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8] (PPIL4) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAAAGTCAAGTGCTGCACTCTCCAGTGCCCGACTGCGCTTATCTGGC
Internal bar code:CGTTGTTAGTAGGCATGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:894
LEAP-Seq percent confirming:64.4737
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGAGCAGTAAGAAGGGC
Suggested primer 2:GACCAGAGCCCATATCTCGC