Insertion junction: CLIP2.075973_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.075973
Chromosome:chromosome 13
Location:2926559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583500 TAF2,GEX2 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTAAGGATTGGGGGGGGGGGGTTGCTGTATGTGGAGAACAGAGTGGT
Internal bar code:TATCTGAGTTTACGGCGGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2540
LEAP-Seq percent confirming:67.8571
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGGAAACCGTAGTCACA
Suggested primer 2:TCCTCCTCCTGCTCAGTACC