Insertion junction: CLIP2.075976_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.075976
Chromosome:chromosome 7
Location:3380227
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335150 (1 of 1) IPR004333//IPR019831 - Transcription factor, SBP-box // Manganese/iron superoxide dismutase, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCCTTGGCCTCAACTAGGAAACGGGACAAACTAGACCATGCAAGAC
Internal bar code:ACGTTTTAACAGTACGCGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5261
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTTCCGGTTTCGACAAAA
Suggested primer 2:CCAGGCTATCTGACTCGCTG