Insertion junction: CLIP2.075982_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.075982
Chromosome:chromosome 16
Location:1137560
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g649950 HFO24,HFO40 (1 of 33) K11254 - histone H4 (H4); Histone H4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCACTCCCAGAATCTGAGCTTCCGGCATCTTCTACACCCGCCTATCC
Internal bar code:AGTGCTTGGACCCTCGCAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1133
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGAAGTTCCCGATATCA
Suggested primer 2:TCCTTGGGCATGATGGTCAC