Insertion junction: CLIP2.075986_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.075986
Chromosome:chromosome 13
Location:765629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566750 (1 of 2) PTHR31385//PTHR31385:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTGGACTCGAGACGACAAGCAATGGATGCGATTCGAGGGGATGAGG
Internal bar code:CTTGGGGACATTAGGGATTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1538
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTTACACCGTATCCTCC
Suggested primer 2:CATACACACACGCAGGCATG