Insertion junction: CLIP2.076006_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076006
Chromosome:chromosome 13
Location:955262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568150 CMAL1,SMM45,CMAL S-adenosyl-L-methionine-dependent methyltransferase; (1 of 1) 2.1.1.199 - 16S rRNA (cytosine(1402)-N(4))-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAAGAAAGGGCAGGAAAGGGCGCGGGAGGCCGGGATGCTGTGTTTGCT
Internal bar code:TCTACTCCACATTTAGAGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:924
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCCGACATTTCTGACGT
Suggested primer 2:GTGCGCGTGTCAAGACAATT