Insertion junction: CLIP2.076008_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076008
Chromosome:chromosome 16
Location:4406521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g668300 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACCGCCTGCGTGAGCGCGAACTTTGCGCTTGACGGCGTCTGCCCGCG
Internal bar code:GGTTCGTGCCAGTGACTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1342
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATGAGTGTTCGCGCGAC
Suggested primer 2:CGGGAGCTTCATGGAAACCT