Insertion junction: CLIP2.076017_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076017
Chromosome:chromosome 4
Location:3699590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g229100 (1 of 2) 2.7.1.158 - Inositol-pentakisphosphate 2-kinase / IP5 2-kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGTCAACTTAACAAGACCTGACCCGGTACAACAAGCAAACGCCCCTC
Internal bar code:TATTGCGCCGTTACACTTCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGTGCACCCATCCATGC
Suggested primer 2:GCATCGATCTGCAGCATGTG