Insertion junction: CLIP2.076019_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076019
Chromosome:plastome
Location:66190
Confidence (%):63
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTGTCCCCTTCCCCTTACGGTACGCCAGTGGACGTCCCCTTCGGGC
Internal bar code:ATTGCGGACAATGGCTCTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:473
LEAP-Seq percent confirming:35.7143
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACCCCTCAGCCAAAAGG
Suggested primer 2:GGGCTGTGTGGGCTAATGAA