Insertion junction: CLIP2.076020_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076020
Chromosome:chromosome 17
Location:5935734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g742050 (1 of 18) IPR011051 - RmlC-like cupin domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACAGCGTCAACCTTTGCCGAAGCCATCAGAAGCTGTGCAGCTGGCCA
Internal bar code:TTATAGTGGACACGCGGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1693
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGTGTGGACATGGGTGT
Suggested primer 2:GTCTACAGCGAGCGACTCTC