Insertion junction: CLIP2.076029_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076029
Chromosome:chromosome 13
Location:3998606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590350 BLZ11 bZIP transcription factor; (1 of 10) PF00170 - bZIP transcription factor (bZIP_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAATAGCTTGGGCAGGCATAACGTGAGGCAAACCCGCTCTCGCCGCCT
Internal bar code:CGGTGTTAGCAAGCCAAGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4196
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGCGCAACAAAGAAGAA
Suggested primer 2:AATGGCAGCCTCAGTAGCAG