Insertion junction: CLIP2.076031_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076031
Chromosome:chromosome 15
Location:360212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g638101 (1 of 1) PF03692 - Putative zinc- or iron-chelating domain (CxxCxxCC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACTATTTCAATATCAACAACAAAGGCTCTACGTTGCCTCCTTGACTT
Internal bar code:GCCGCATCGGATGTTGCATGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1678
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGGAAACTCTCGCAGT
Suggested primer 2:CGCAAACACCACTCACACAG