Insertion junction: CLIP2.076043_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076043
Chromosome:chromosome 6
Location:5100740
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282700 (1 of 1) PTHR24414//PTHR24414:SF29 - FAMILY NOT NAMED // SEGMENTATION PROTEIN CAP'N'COLLAR 5'UTR
Cre06.g282750 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATGACAGCTTGTACTCTGTCCCTCCACCGACGTGTTTAGCTTTTGTT
Internal bar code:CACTAGCTCTGAGCCGAACTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1038
LEAP-Seq percent confirming:8.69565
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGTTGGATTTGCTGCGG
Suggested primer 2:GCGACCAAGCATGCATACTG