Insertion junction: CLIP2.076052_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076052
Chromosome:chromosome 3
Location:1730597
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g800300 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGGTCACCACTGGCCATCGCGTCCATCATAGTCGCGGGAATCACCT
Internal bar code:TTTGAGGTTACTCTATGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5272
LEAP-Seq percent confirming:0.917431
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:108
LEAP-Seq n unique pos:109

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGAGCACTAGAGCATGGC
Suggested primer 2:GATGCGACACTACCTCGGAG