Insertion junction: CLIP2.076056_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076056
Chromosome:chromosome 6
Location:952881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256420 (1 of 1) K15196 - transcription factor IIIB 90 kDa subunit (BRF1, GTF3B) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGACCAATGCGGGCAGCGTTTCGCCGATGTGGCTGTACAACTGTACCG
Internal bar code:GCTCTTGCAAACGCCCCATGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:57.6923
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGGAGGGCAAGTTAGTG
Suggested primer 2:GTTCGCGGATGATTTGGAGC