Insertion junction: CLIP2.076066_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076066
Chromosome:chromosome 6
Location:4928028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281000 (1 of 52) PF00856 - SET domain (SET) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGCATGGCGGCCAGGCCGTGCCCTGCCGTGCCCCACCCCTGGCATGT
Internal bar code:ACTTGGCGAATGATTATGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2907
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGAGAACTTGGGTGAGT
Suggested primer 2:CCTGCATTACCCGGAAGAGG