Insertion junction: CLIP2.076068_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076068
Chromosome:chromosome 8
Location:3105392
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAATGCCTGCGCTGACCTGAGCTCTCCGGCAACCCCCGCCTGCGTGCT
Internal bar code:CTATACTTAATTTGTGGCCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:85.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGATCGTGGCGTTGGTG
Suggested primer 2:GGTTGGAAGCGCTCAAAGTG