Insertion junction: CLIP2.076072_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076072
Chromosome:chromosome 5
Location:3167665
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g232000 (1 of 1) IPR001623//IPR011989 - DnaJ domain // Armadillo-like helical 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCCTGGTACAAGCAAGAGCAGAGGGTGGTGAGGAGCACACAGTCCCG
Internal bar code:GCGCGGCGCAAACCCGCAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1245
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAATAATGCGCTGGCTTC
Suggested primer 2:GCATTTATTCGCAGCTGCCA