Insertion junction: CLIP2.076078_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076078
Chromosome:chromosome 14
Location:616195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g611950 PPR-superfamily protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATAGACGCAGATCTCCTCGTTGGACCTTTTTGGAACAGCGCTAGCACA
Internal bar code:GGTTTGATCTCTTCCAGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1988
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGGCTATCGTTGTGCAA
Suggested primer 2:CAACCCAGATGGCACCTCTT