Insertion junction: CLIP2.076081_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076081
Chromosome:chromosome 3
Location:8990434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800414 (1 of 1) PTHR12864//PTHR12864:SF13 - RAN BINDING PROTEIN 9-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCTATAAATTTCAAAGTTCAGATGCTTATGTCGTCATACTTGTGAACA
Internal bar code:TGCGGACTATATCCGAGAGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTCTTGGGTGAAGGAGG
Suggested primer 2:GTGTGTGTGTGTGTGTGTGG