Insertion junction: CLIP2.076082_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.076082
Chromosome:chromosome 17
Location:3616805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725250 (1 of 39) IPR009003 - Peptidase S1, PA clan 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATGGCCGCAGCCTTTTGGCAGCAGGCAGGCGCCTCGCCAGCGCGGTC
Internal bar code:TTTAGAAACTTAAGCGGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1774
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGTGTACAGCTATCCGG
Suggested primer 2:GGTGTGCTGTCACTGCTACT