Insertion junction: CLIP2.076085_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076085
Chromosome:chromosome 8
Location:3807747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381300 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGATAAGCTCAGGTGCTCGTAGCTAAGCAGTGGGCGTAAAAGCTGTT
Internal bar code:GTCTTTCCCTCCGGGACTGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4294
LEAP-Seq percent confirming:59.0909
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACCCTGTCCCATCAC
Suggested primer 2:GATAGATGGGGGCGGACAAG