Insertion junction: CLIP2.076086_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076086
Chromosome:chromosome 6
Location:8492861
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309050 NOT2 (1 of 1) K12605 - CCR4-NOT transcription complex subunit 2 (CNOT2, NOT2); Negative regulator of transcription 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGATGACAAGTGCCACTTCGCACTCCTCTATGCCAGGACTTGTACCC
Internal bar code:CGGAAGGCGGGCTCAGCTACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3941
LEAP-Seq percent confirming:83.6066
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGCTGTGGATGCTGCA
Suggested primer 2:TTGGGAACGCACTGCAAATG