Insertion junction: CLIP2.076087_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076087
Chromosome:chromosome 11
Location:2178649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467735 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCATGCCCACACCCATGCTCGCACACACTCAACTCTCGTTCACCACACC
Internal bar code:TGGACTTCATGTCATCATAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3087
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TACACAAGCCTGCTGACCTG
Suggested primer 2:CAGCAAAATATTCCGCCGCA