Insertion junction: CLIP2.076097_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076097
Chromosome:chromosome 16
Location:59167
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695850 5'UTR
Cre16.g695851 (1 of 2) 2.1.1.229 - tRNA (carboxymethyluridine(34)-5-O)-methyltransferase / tRNA methyltransferase 9 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGTTGCAACTCCTGAGGAATGTCGCAAGAAGACATTATATTAAAGGA
Internal bar code:TGGAACAAGTGGGGTAAGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:890
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACAGCACACACAGCTC
Suggested primer 2:GGACATGCCTCCGATACCAG