Insertion junction: CLIP2.076097_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076097
Chromosome:chromosome 16
Location:59177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g695850 5'UTR
Cre16.g695851 (1 of 2) 2.1.1.229 - tRNA (carboxymethyluridine(34)-5-O)-methyltransferase / tRNA methyltransferase 9 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACAACTCTTCCCAGCGGCTCAGTGCCCATGATACTCTCCGCAAATT
Internal bar code:AACGGCATATGTCCATACCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGACATGCCTCCGATACCAG
Suggested primer 2:CAACACAGCACACACAGCTC