Insertion junction: CLIP2.076109_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076109
Chromosome:chromosome 6
Location:1041644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800615 (1 of 2) 2.4.1.242 - NDP-glucose--starch glucosyltransferase / Waxy protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGGCATTGCCCTGCAGAAATGTCCCACGCACGCCCAGGCATGTACGG
Internal bar code:AAGTGTGCGATTTCCATTGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1690
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGAGGAGGAGGAGA
Suggested primer 2:CGAAGGCACCGAAACTACCT