Insertion junction: CLIP2.076111_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076111
Chromosome:chromosome 15
Location:5564684
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre46.g761047 (1 of 3) IPR000104//IPR027417 - Antifreeze protein, type I // P-loop containing nucleoside triphosphate hydrolase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCACCATGGGCTGGCGGGGGAAAAACCCCCGCTCCCCACTCCATGGTG
Internal bar code:GCAGCTTGTGACAAGCAGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1698
LEAP-Seq percent confirming:59.6154
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGAGCGTGTGGACACT
Suggested primer 2:CGAAGGAACATGTTAGCGCG