Insertion junction: CLIP2.076122_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076122
Chromosome:chromosome 17
Location:526942
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699350 SMM51 (1 of 13) PF12847 - Methyltransferase domain (Methyltransf_18); S-adenosyl-L-methionine-dependent methyltransferase 3'UTR
Cre17.g699400 (1 of 6) PTHR10994//PTHR10994:SF72 - RETICULON // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCATTTGACTGCGACAAGGCTACAAAGACGGTCGCCACAGGCACCAAG
Internal bar code:AGAGTAAATGTGAGGGAACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGTACTGCCTAGCTGG
Suggested primer 2:GTTGGCGTAAGGGTGAGGAA