Insertion junction: CLIP2.076126_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076126
Chromosome:plastome
Location:75762
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802294 ChreCp029,psbH,2717030 photosystem II reaction center protein H; (1 of 1) K02709 - photosystem II PsbH protein (psbH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTAAGGCTAGCTGCTAAGTCTTCTTTTCGCTAAGGTAAACTAAGCAA
Internal bar code:TGTGAGATTGTGGGCCTTTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:463
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGACGATGGGGGCTTTTTGT
Suggested primer 2:GGGGAAAAGGGACTGCCTAC