Insertion junction: CLIP2.076150_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076150
Chromosome:chromosome 3
Location:455588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144947 (1 of 34) IPR000571 - Zinc finger, CCCH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTCTCCAACCCTCACAACCGGAACTGCTCAGCACTCAGCCAGAAAAA
Internal bar code:CAACGGTTCTCACCGTGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3098
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:TGAGGGGTCGTGATTGTGTG