Insertion junction: CLIP2.076172_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076172
Chromosome:chromosome 16
Location:5867734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679550 FAP277 Flagellar Associated Protein 277; (1 of 1) K13963 - serpin B (SERPINB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGTCGAACGACTCACCCGCGCCGTTGAGGGCCAGCGTGAGTGCGTAAA
Internal bar code:TTTATTACAGGACGAAGGTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:734
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAATAGTCAAAGGGGCCCGG
Suggested primer 2:GCACGGTGTTTTGGCAGATT