Insertion junction: CLIP2.076178_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.076178
Chromosome:chromosome 12
Location:2009735
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g801373 (1 of 2) IPR000104//IPR000477//IPR005135 - Antifreeze protein, type I // Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCGGGGACCGTGCTACAAATGGCTCCACAGTTAGCCGCCCTGAAGGC
Internal bar code:TGGCAGGCCCCAGTAGACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4186
LEAP-Seq percent confirming:44.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTGCAGTCCCAAAACCA
Suggested primer 2:GTTTGATGCCAGCCCACATG