Insertion junction: CLIP2.076180_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.076180
Chromosome:chromosome 3
Location:2176479
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157100 (1 of 1) PF03420 - Prohead core protein serine protease (Peptidase_S77) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAACTAGATTGATCCTGCAGGATGCGGTACTGTATGGTGCGGCGCTTGAG
Internal bar code:AACCGTTTAGCGAGAGACATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1027
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCGAGCTCATACGGTC
Suggested primer 2:AGCAGGTACGGTGACATGTG