Insertion junction: CLIP2.076188_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.076188
Chromosome:chromosome 16
Location:6624777
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g673852 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTAGACGATATGAGGTGGGAGGCACAGAGGAGAGGTGAGGGGAGGGGG
Internal bar code:GGTAGGGTTAACACGGAAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2166
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACGCTTGTTTGCTCAGCTTG
Suggested primer 2:ATCTGGCTGCTGTTGACCTC