Insertion junction: CLIP2.076199_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.076199
Chromosome:chromosome 16
Location:5363621
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATAGAAGTGTTGGCGTCTGAGTGGGTGGGGGCACGCTGCACGCACA
Internal bar code:CATATACATGAGTGACTAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1462
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAACGTGTTTGTGTCGG
Suggested primer 2:GAGGGAGAGGACATAAGCGC