Insertion junction: CLIP2.076201_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.076201
Chromosome:chromosome 1
Location:4613056
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g031850 ACD1 (1 of 1) PTHR10314//PTHR10314:SF70 - SER/THR DEHYDRATASE, TRP SYNTHASE // SUBFAMILY NOT NAMED; 1-aminocyclopropane-1-carboxylate deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCACTCGGTGAAAAACTTGTGGTGGCCCGCGGCAGCCGTGTGTTGGGC
Internal bar code:GAGATGGTGGGAGATGGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2113
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGAGGTCAGTGACTTGCA
Suggested primer 2:GGTAATAGGCGGTCCCTTCG