Insertion junction: CLIP2.076207_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.076207
Chromosome:chromosome 9
Location:3244936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394843 (1 of 1) PF07967 - C3HC zinc finger-like (zf-C3HC) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTGCACAGGGTGCTAGCTAGGCGTTCCAATTACGGTACTGGAAGTCG
Internal bar code:TTCTGGGGGGGTCGCCGTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:5440
LEAP-Seq percent confirming:91.4286
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTTGATGTGTCGAGGGG
Suggested primer 2:TTCCTGTACTCACGAACGGC